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CAZyme Gene Cluster: MGYG000000054_12|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000000054_01407 | Xylosidase/arabinosidase |
CAZyme | 25525 | 26493 | - | GH43_29| GH43 |
| MGYG000000054_01408 | Extracellular exo-alpha-L-arabinofuranosidase |
CAZyme | 26490 | 28472 | - | GH51 |
| MGYG000000054_01409 | Extracellular endo-alpha-(1->5)-L-arabinanase |
CAZyme | 28500 | 30041 | - | GH43_4| GH43 |
| MGYG000000054_01410 | Sensor histidine kinase RcsC |
TF | 30197 | 34477 | + | HTH_AraC+HTH_AraC |
| MGYG000000054_01411 | TonB-dependent receptor SusC |
TC | 34780 | 37989 | + | 1.B.14.6.1 |
| MGYG000000054_01412 | hypothetical protein |
null | 38028 | 39779 | + | SusD-like_3| SusD_RagB |
| MGYG000000054_01413 | hypothetical protein |
null | 39828 | 41603 | + | Big_3 |
| MGYG000000054_01414 | hypothetical protein |
CAZyme | 41673 | 43577 | + | GH43_4| GH43 |
| MGYG000000054_01415 | Aldose 1-epimerase |
null | 43750 | 44889 | + | Aldose_epim |
| MGYG000000054_01416 | Sodium/glucose cotransporter |
TC | 44915 | 46609 | + | 2.A.21.3.19 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is arabinan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000000054_01407 | GH43_e199|3.2.1.- | xylan |
| MGYG000000054_01408 | GH51_e23|3.2.1.55 | arabinan |
| MGYG000000054_01409 | GH43_e128|3.2.1.99 | arabinan |
| MGYG000000054_01414 | GH43_e169|3.2.1.99 | arabinan |
Substrate predicted by dbCAN-PUL is arabinan download this fig
